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yhdV [2019-04-15 19:46:35]
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yhdV [2019-04-15 19:46:35]

flouride exporter (together with [protein|2F86A2FF36ED00DB0A9A91B064EBD095F5E759ED|FluC])
locus
BSU09610
pI
10.36
mw
13.77 kDa
protein length
131 aa Sequence Blast
gene length
396 bp Sequence Blast
function
export of flouride
product
flouride channel
essential
no
synonyms
crcBB
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.11|Other exporters]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.10|Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,037,306 → 1,037,701

    Phenotypes of a mutant

  • very sensitive to flouride [pubmed|30430725]

    • The protein

    Protein family

  • crcB family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|2F86A2FF36ED00DB0A9A91B064EBD095F5E759ED|FluC]

    • Structure

  • [PDB|6B2A] (from E. coli, 35% identity, aa 6 ... 115) [pubmed|28952925]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|04CACAF4F786090AB67D7C606C944F07B7A7FE55|yhdW]-[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]-[gene|2F86A2FF36ED00DB0A9A91B064EBD095F5E759ED|fluC]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A699 (yhdV::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/699 NBRP B. subtilis, Japan]
  • BKE09610 (Δ[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCGCGCCTCCGATAAAAA, downstream forward: _UP4_CAAAGAAAGGGGCTGCAGGA
  • BKK09610 (Δ[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCGCGCCTCCGATAAAAA, downstream forward: _UP4_CAAAGAAAGGGGCTGCAGGA

    • References

    Reviews

  • 28514705

    • Research papers

  • 28952925,23991286,30430725